Index

A

Align module

AnalyseInteractions() (Docking.RDOCK method) (Docking.VINA method)

C

Cavity() (Docking.RDOCK method)

CreateHMMProfile() (Modeling.Modeller method)

D

Docking module

F

File() (Utils.Upload method) FileParse() (Utils.Upload method)

Files() (Utils.Upload method) FilesParse() (Utils.Upload method)

G

GenereateConformations() (Utils.RepOdor method)

Grid() (Docking.VINA method)

M

MakeModels() (Modeling.Modeller method) Modeling module Modeller (class in Modeling) module Align Docking Modeling Utils

MolAlignment() (Align.Tethering method) MolsAlignment() (Align.Tethering method)

Q

Qmeanbrane() (Modeling.Modeller method)

R

RDOCK (class in Docking) RepOdor (class in Utils)

Run() (Docking.RDOCK method) (Docking.VINA method)

S

search() (Utils.RepOdor method)

SearchTemplates() (Modeling.Modeller method)

T

Tethering (class in Align)

U

Upload (class in Utils)

Utils module

V

ViewInteractionsMap() (Docking.RDOCK method) (Docking.VINA method) ViewModels() (Modeling.Modeller method)

ViewPoses() (Docking.RDOCK method) (Docking.VINA method) VINA (class in Docking)